Leaf Doctor: UH plant expert launches third app

May 13, 2014 7:26 pm 0 comments

Leaf Doctor 1Fresh from his success with two widely utilized smartphone apps, plant pathologist Scot Nelson has created a new and more technical app, the Leaf Doctor, for a more specialized audience.

Nelson, who works at the College of Tropical Agriculture and Human Resources at the University of Hawaii, doesn’t anticipate that the Leaf Doctor will have the same broad, popular appeal as his Plant Doctor app. For many of those who will use the Leaf Doctor, though, it is likely to be a professional game-changer.

Nelson’s Plant Doctor app helps to identify disease on plants and has been used all over the globe, from Iceland to Indonesia. Likewise, his second app, Pic-a-Papaya, tracks papaya ringspot virus in Hawaii — originally intended only for use in the Honolulu area but has been getting submissions from throughout the Hawaiian Islands.

The Leaf Doctor focuses on the finer points of diagnosing plant diseases. Disease tends to increase over time and space, whether in an individual plant or in a plant population, and researchers need to know how fast and how far it’s increasing. Plant epidemiology includes the assessment of disease in order to make a mathematical model of its progress in time and space.

Being able to accurately quantify disease is necessary for growers looking at different plant varieties for disease resistance, or breeders attempting to introduce increased resistance into a new hybrid. It’s also useful for those advising farmers about when to time certain pest-management strategies, since some forms of management are more effective at certain points in the development of an epidemic.

Currently those who assess plant disease severity use a quite low-tech method that hasn’t changed much in decades: they obtain rough estimates by comparing what they see with printed or online “standard area diagrams.” These standardized drawings—usually not even photographs—depict what different percentages of host coverage of a given disease look like on a particular type of plant.

There is one computer-based plant disease assessment system available, Nelson explains. Only available for PC users, it costs $795 and is difficult to use, not interactive, and not particularly accurate. By contrast, the easy-to-use, interactive app that he has created may be downloaded for free to iPhones and other iOS devices and is accurate to within a percentage point.

Leaf Doctor 2Nelson notes that, while the app was not simple to develop, it is simple to use: The user takes a picture with the iPhone or calls one up from the phone’s gallery, then identifies the coloration of healthy tissue in the photo by touching the screen to identify up to seven healthy areas on the plant to account for natural color variations, light changes, and veins. A slide bar is used is used to mask out everything that is not healthy, which the app identifies as diseased tissue and calculates as a percentage of total leaf area displayed.

Users are then able to email the image and the generated assessment data to themselves or others; they are also able to build specialized and far more accurate standard area diagrams by creating a gallery of images showing a range of percentages of disease. If Nelson is able to secure more funding next year, he hopes to add further analytical functions to the app.

More information may be found about the app at Nelson’s website.

He anticipates that the main users of the app will be plant epidemiologists and breeders, and plant pathology professors and students, not necessarily home gardeners. However, it may have more users than originally assumed, because it is free and fun to use, and its far-ranging applications could be used for quantifying the area in any photograph for skin disease or invasive species.

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